
Class for Simulation Results Enrichment Survival
Source:R/class_simulation_results.R
SimulationResultsEnrichmentSurvival.RdA class for simulation results survival in enrichment designs.
Details
Use getSimulationEnrichmentSurvival()
to create an object of this type.
Fields
accrualIntensityThe absolute accrual intensities. Is a numeric vector of length
kMax.accrualTimeThe assumed accrual time intervals for the study. Is a numeric vector.
adaptationsIndicates whether or not an adaptation takes place at interim k. Is a logical vector of length
kMaxminus 1.allocationRatioPlannedThe planned allocation ratio (
n1 / n2) for the groups. For multi-arm designs, it is the allocation ratio relating the active arm(s) to the control. Is a positive numeric vector of length 1.calcEventsFunctionAn optional function that can be entered to define how event size is recalculated. By default, recalculation is performed with conditional power with specified
minNumberOfEventsPerStageandmaxNumberOfEventsPerStage.conditionalPowerThe conditional power at each stage of the trial. Is a numeric vector of length 1 containing a value between 0 and 1.
conditionalPowerAchievedThe calculated conditional power, under the assumption of observed or assumed effect sizes. Is a numeric matrix.
cumulativeEventsPerStageThe cumulative number of events per stage. Is a numeric matrix.
directionUpperSpecifies the direction of the alternative, only applicable for one-sided testing. Default is
TRUEwhich means that larger values of the test statistics yield smaller p-values. Is a logical vector of length 1.dropoutRate1The assumed drop-out rate in the treatment group. Is a numeric vector of length 1 containing a value between 0 and 1.
dropoutRate2The assumed drop-out rate in the control group. Is a numeric vector of length 1 containing a value between 0 and 1.
dropoutTimeThe assumed time for drop-out rates in the control and treatment group. Is a numeric vector of length 1.
earlyStopThe probability to stopping the trial either for efficacy or futility. Is a numeric vector.
effectListThe list of subsets, prevalences and effect sizes with columns and number of rows reflecting the different situations to be considered.
effectMeasureCriterion for treatment arm/population selection, either based on test statistic (
"testStatistic") or effect estimate ("effectEstimate"). Is a character vector of length 1.epsilonValueNeeds to be specified if
typeOfSelection = "epsilon". Is a numeric vector of length 1.eventsPerStageDeprecated: use
singleEventsPerStageorcumulativeEventsPerStageinstead Is a numeric matrix.eventTimeThe assumed time under which the event rates are calculated. Is a numeric vector of length 1.
expectedNumberOfEventsThe expected number of events under specified alternative. Is a numeric vector.
expectedNumberOfSubjectsThe expected number of subjects under specified alternative.
futilityPerStageThe per-stage probabilities of stopping the trial for futility. Is a numeric matrix.
futilityStopIn simulation results data set: indicates whether trial is stopped for futility or not.
intersectionTestThe multiple test used for intersection hypotheses in closed systems of hypotheses. Is a character vector of length 1.
iterationsThe number of iterations used for simulations. Is a numeric vector of length 1 containing a whole number.
kappaThe shape of the Weibull distribution if
kappa!=1. Is a numeric vector of length 1.maxNumberOfIterationsThe number of simulation iterations. Is a numeric vector of length 1 containing a whole number.
maxNumberOfSubjectsThe maximum number of subjects for power calculations. Is a numeric vector.
maxNumberOfSubjectsPerStageDetermines the maximum number of subjects per stage for data-driven sample size recalculation. For two treatment arms, is the number of subjects for both treatment arms. For multi-arm designs, is the minimum number of subjects per selected active arm. Is a numeric vector of length
kMaxcontaining whole numbers.minNumberOfSubjectsPerStageDetermines the minimum number of subjects per stage for data-driven sample size recalculation. For two treatment arms, is the number of subjects for both treatment arms. For multi-arm designs, is the minimum number of subjects per selected active arm. Is a numeric vector of length
kMaxcontaining whole numbers.numberOfPopulationsThe number of populations in an enrichment design. Is a numeric matrix.
plannedSubjectsDetermines the number of cumulated (overall) subjects when the interim stages are planned. For two treatment arms, is the number of subjects for both treatment arms. For multi-arm designs, refers to the number of subjects per selected active arm. Is a numeric vector of length
kMaxcontaining whole numbers.populationsThe number of populations in an enrichment design. Is a numeric vector of length 1 containing a whole number.
populationEventsPerStageThe cumulative number of events per stage Is a numeric matrix.
rejectAtLeastOneThe probability to reject at least one of the (multiple) hypotheses. Is a numeric vector.
rejectedPopulationsPerStageThe simulated number of rejected populations per stage.
rValueNeeds to be specified if
typeOfSelection = "rBest". Is a numeric vector of length 1.seedThe seed used for random number generation. Is a numeric vector of length 1.
selectedPopulationsThe selected populations in enrichment designs.
selectPopulationsFunctionAn optional function that can be entered to define the way of how populations are selected.
singleNumberOfEventsPerStageDeprecated: use
singleEventsPerArmAndStageorsingleEventsPerSubsetAndStageinsteadstratifiedAnalysisFor enrichment designs, typically a stratified analysis should be chosen. When testing means and rates, a non-stratified analysis can be performed on overall data. For survival data, only a stratified analysis is possible. Is a logical vector of length 1.
studyDurationThe study duration for specified effect size. Is a positive numeric vector.
successCriterionDefines when the study is stopped for efficacy at interim.
"all"stops the trial if the efficacy criterion has been fulfilled for all selected treatment arms/populations,"atLeastOne"stops if at least one of the selected treatment arms/populations is shown to be superior to control at interim. Is a character vector of length 1.successPerStageThe simulated success probabilities per stage where success is defined by user. Is a numeric matrix.
thetaH1The assumed effect under the alternative hypothesis. For survival designs, refers to the hazard ratio. Is a numeric vector.
thresholdThe selection criterion: treatment arm/population is only selected if
effectMeasureexceedsthreshold. Either a single numeric value or a numeric vector of lengthactiveArmsreferring to a separate threshold condition for each treatment arm.typeOfSelectionThe way the treatment arms or populations are selected at interim. Is a character vector of length 1.